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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951472.1_cds_XP_016491474.1_81786
CDS Infomation

[gene=LOC107811117] [db_xref=GeneID:107811117] [protein=rop guanine nucleotide exchange factor 3-like] [protein_id=XP_016491474.1] [location=complement(join(2704..2826,2937..3278,3384..3692,3791..3865,3950..4104,4193..4309,4390..4702))] [gbkey=CDS]
Sequence

ATGGAAAATATTTCAAGTCCTGATGAAAGTCCTGATGTGGGATATGGATATCAACCATCA
CCATCTTCTGTGGATGATCAATCACCTACTGAAACAACAGGTTTTTCGACGTTGAGTGGC
TATTCTTTTGCCTATTGCAGAACAAACTCAGAGACCTCAGCCTTTTCAGAACATACAGAT
GAAAATAGTTGGTCTGAGACAGGATCTCCTATGAGCTCGCGAGGCATGAAATCTCCCACT
CGTGCTGTTCTTTCGAGACTAGGAATGAGGCAGCACAAGACTATTGCAGATGATCCTGAA
ACAATAGATTTAGAGCTTGAATTGATGAAGGAGAGATTTTCAAAGTTGTTATTAGGAGAG
GACATGTCAGGAGGGGGAAAAGGTGTATCAACAGCAGTGACAATCTCAAATTCCATTACA
AATCTTTATGCATCTATGTTTGGTCAACACCAAAGATTGGAACCTTTACATCCTGACAAG
AAAATAATGTGGAAGAGAGAGATGAATTGTCTCTTATCTATATGTGATTACATTGTGGAA
TTTGTTACTACATCACAAAAGTTTCAAGATGGAACCACTGTTGAGGCATTGACAAGCAGG
CCTAGATCAGATATCTACATCAACCTTCCTGCACTGAGAAAACTCGACGCCATGCTCCTG
GAAATCTTGGACAGTTTTGAGGCCACTGAGTTCTGGTATGCTGAGCAAGGAAGCATGTCA
AGCAACTCAACACGTGCTGGATCGTTTAGGAAGATTATTCAGGTTCAGCCTCAACCTCAG
CGCAAAGAAGAGAAGTGGTGGTTACCAGTTGTTTGTGTTCCTTCTGGTGGAATCTCCGAG
AAGGCAAGGAAGCACTTGAGACACAAACGCGACTGTGCCAACCAAATTCACAAAGCAGCA
ATGGCTATCAATAGCAGCATTCTTTCTGAAATGGAAATCCCAGAATCATACATGGCATCA
CTCCCTAAGAGTGGAAAGGCGAGTGTTGGAGACTCAATCTATCGCCACATGTATTCAGCA
GAGAAGTTTTCCCCTGAACATCTCCTTGACAGTCTAAACATAAGCTCTGAACATGAAGCA
CTTGAACTTGCTGACAAGATTGAAGCTTCAATGTATACATGGAAACGTAAAACATGCATG
CCTCAATCGAAATCATCATGGGTCATGGTAAAAGATCTTGTCTCTGAAGATCGGACTGAT
AAGAATCATGTCTTAGCAGAACGAGCAGAAAGTTTGTTGTTTTCTTTGAAGCAACGGTAT
CCTGAACTTTCACAAACAACATTGGACACAAGCAAGATCCATTTCAATAAGGATGTTGGA
AAGGCAATCTTGGAGAGCTATTCTAGAGTATTGGAAAGTTTGGCATTCAACGTTGTTGCT
TGGATTGAAGATGTGCTTTTTGTAGATAAGACCATGAAAAACCAAGAAGAGTAG

Peptide Sequence

PEP ID

XP_016491474.1
PEP Infomation

PREDICTED: rop guanine nucleotide exchange factor 3-like [Nicotiana tabacum]
Sequence

MENISSPDESPDVGYGYQPSPSSVDDQSPTETTGFSTLSGYSFAYCRTNSETSAFSEHTD
ENSWSETGSPMSSRGMKSPTRAVLSRLGMRQHKTIADDPETIDLELELMKERFSKLLLGE
DMSGGGKGVSTAVTISNSITNLYASMFGQHQRLEPLHPDKKIMWKREMNCLLSICDYIVE
FVTTSQKFQDGTTVEALTSRPRSDIYINLPALRKLDAMLLEILDSFEATEFWYAEQGSMS
SNSTRAGSFRKIIQVQPQPQRKEEKWWLPVVCVPSGGISEKARKHLRHKRDCANQIHKAA
MAINSSILSEMEIPESYMASLPKSGKASVGDSIYRHMYSAEKFSPEHLLDSLNISSEHEA
LELADKIEASMYTWKRKTCMPQSKSSWVMVKDLVSEDRTDKNHVLAERAESLLFSLKQRY
PELSQTTLDTSKIHFNKDVGKAILESYSRVLESLAFNVVAWIEDVLFVDKTMKNQEE

Transcript Sequence

Gene sequence data has not been registered.